Species identity and evolution in R


1. Brown et al. (2012) Spider: An R package for the analysis of species identity and evolution, with particular reference to DNA barcoding. Molecular Ecology Resources. URL.

2. Collins et al. (2012) Barcoding's next top model: an evaluation of nucleotide substitution models for specimen identification. Methods in Ecology and Evolution. URL.

3. Collins et al. (2012) Barcoding and border biosecurity: identifying cyprinid fishes in the aquarium trade. PLoS ONE. URL.

4. Boyer et al. (2012) Sliding window analyses for optimal selection of mini-barcodes, and application to 454-pyrosequencing for specimen identification from degraded DNA. PLoS One. URL.

5. Brown et al. (2012) Molecular phylogenetics of a South Pacific sap beetle species complex (Carpophilus spp., Coleoptera: Nitidulidae). Molecular Phylogenetics and Evolution. URL.

6. Herrera et al. (2012) Spatial and temporal patterns of genetic variation in the widespread antitropical deep-sea coral Paragorgia arborea. Molecular Ecology. URL.

7. Collins (2012) Investigating interspecific hybridisation in ornamental fishes. figshare. URL.

8. Van der Bank et al. (2012) DNA barcoding reveals micro-evolutionary changes and river system-level phylogeographic resolution of African silver catfish Schilbe intermedius (Actinopterygii: Siluriformes: Schilbeidae) from seven populations across different African river systems. Acta Ichthyologica et Piscatoria. URL.

9. Collins and Cruickshank (2013) The seven deadly sins of DNA barcoding. Molecular Ecology Resources. URL.


What's up


papers using SPIDER



Spider release notes

Spider summary page on R-Forge

Spider public forum on R-Forge

Ape home page

Lincoln University

4th International Barcode Of Life Conference

Sam's BLOG

Rupert's Web site

Ecology lab BLOG



Email usmailto:stephane.boyer@lincoln.ac.nz?subject=Spider%20Visitor